CDS

Accession Number TCMCG081C24670
gbkey CDS
Protein Id XP_002275293.1
Location complement(join(16617001..16617080,16617334..16617391,16617483..16617565,16617643..16617753,16617879..16618023,16618511..16618603,16618905..16619150))
Gene LOC100260745
GeneID 100260745
Organism Vitis vinifera

Protein

Length 271aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_002275257.3
Definition PREDICTED: ribosomal RNA small subunit methyltransferase nep-1 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category J
Description ribosomal RNA small subunit methyltransferase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14568        [VIEW IN KEGG]
EC 2.1.1.260        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000154        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0001510        [VIEW IN EMBL-EBI]
GO:0001701        [VIEW IN EMBL-EBI]
GO:0001824        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0006997        [VIEW IN EMBL-EBI]
GO:0007000        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008173        [VIEW IN EMBL-EBI]
GO:0008649        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009792        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0017126        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031167        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043009        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070037        [VIEW IN EMBL-EBI]
GO:0070475        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140102        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTACGGCCTTATGCCATAAAAGGGCACAAGCGAAAGAAGAGGGAAGAGAACTATGATAGAGAGGAAGTAGAACAATTGCTAGAAGAGGAGACAGCAGCAACAGCCACACAGGATGAGAAGAAGGCAGAAGAAGTCACACTTGAACTTCCTGGTATCCCACTTGTCCCATCCAACTTGAACAACAAGACTGGTGTTACCTTCATTCTTGAGAGGGCTTGTTTGGAAGTTGCAAAAGTTGGAAAGAGTTACCAGCTATTGAGCTCAGAGGATCATGCAAATTTCCTGAGGAAAAATAACAAAAACCCTGCTGAATACAGACCTGACATTCTTCATCAGGCTCTCTTAACTATTTTAGATAGCCCACTAAATAAGGCTGGGAGGCTACGAGCTGTGTATGTAAGAACCGAGAAAGGTGTGCTTTTTGAAGTTAAGCCACATGTTCGCATTCCAAGGACATATAAGCGGTTCTCTGGGATCATGTTGCAGCTGTTACAAAAACTGAGCATTACTGCTGTTGGTAAGCGGGAGAAACTTTTACGCGTTATCAAGAACCCAGTTACTCAATACTTACCTGTTAACTCTCGAAAAATAGGCTTCTCATATAGTTCAGAAAAGTCAATTCCAATGCGGGACTATGTGGCTGCTGTTAGCGATGATGTGGACCTTGTTTTTGTGGTTGGTGCAATGGCCCATGGGAAAATTAGTAACGATTATACAGATGATTTCATAGCAATTTCTGGCTATCCATTGAGTGCTGCATGGTGTACTTATTTGATCTGCGGGGCCTTGATGCAGAAGTGGAATATATTTTAG
Protein:  
MVRPYAIKGHKRKKREENYDREEVEQLLEEETAATATQDEKKAEEVTLELPGIPLVPSNLNNKTGVTFILERACLEVAKVGKSYQLLSSEDHANFLRKNNKNPAEYRPDILHQALLTILDSPLNKAGRLRAVYVRTEKGVLFEVKPHVRIPRTYKRFSGIMLQLLQKLSITAVGKREKLLRVIKNPVTQYLPVNSRKIGFSYSSEKSIPMRDYVAAVSDDVDLVFVVGAMAHGKISNDYTDDFIAISGYPLSAAWCTYLICGALMQKWNIF